SEQanswers - View Single Post - ORFs in contigs from strand-specific RNA-seq

panos_ed · 10-19-2012, 05:18 AM

Hello,

In contigs assembled from strand-specific RNA-seq reads should the ORF be on the plus strand, or could it also be on the minus?

Thanks,
Panos

10-19-2012, 05:18 AM	#1
panos_ed Member Location: Geneva, Switzerland Join Date: May 2010 Posts: 11	ORFs in contigs from strand-specific RNA-seq Hello, In contigs assembled from strand-specific RNA-seq reads should the ORF be on the plus strand, or could it also be on the minus? Thanks, Panos