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Old 09-08-2011, 03:58 AM   #1
Palgrave
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Location: norway

Join Date: Aug 2011
Posts: 73
Default Problems with rfam_scan.pl

I ran the program, but got the following error (in bold):

robin@robin-Aspire-3810T:~/Downloads$ perl rfam_scan.pl -o test4h --nobig /home/robin/Downloads/Rfam.cm /home/robin/Downloads/4hLong.fastaWARN: No BLAST database specified. Your search may be extremely slow.
Also, the model-specific global/local mode is not used, therefore
curated Rfam thresholds may not be meaningful.
Use of uninitialized value $rfamid in hash element at rfam_scan.pl line 276, <GEN1> line 988228.
Died at rfam_scan.pl line 281, <GEN1> line 988228.

Any idea?
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