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Old 02-03-2015, 03:57 AM   #3
Location: Europe

Join Date: Mar 2014
Posts: 42

Thank you for your response. In this case I know from the short read information that the sample is very diverse with many genes (x,y, z etc) with different functional roles and one set of genes with a specific functional role shows up as highly abundant. When I look at the assembled results, most the genes with functional roles are from three microorganisms. Why the difference between the number of functional genes with different roles in the short read analysis vs the assembled one?
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