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Old 02-21-2017, 01:50 AM   #4
tristan dubos
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Location: France

Join Date: Dec 2015
Posts: 39
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I think if i understand right your problematic is which tools you can use to calculate your metrics, isn't it ?
if you want to produce the exactly same result you should use the same tool which produce the file : https://github.com/taoliu/MACS/
You will need a bam file from a chip-seq if you use this tool , and maybe a bed for the genome region you are interested in (sorry never used this tool ).

Regards,

Tristan
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