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Old 09-25-2013, 10:52 AM   #8
Olaf Blue
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Location: Madison, WI

Join Date: Nov 2010
Posts: 58
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Hi BBM, basically the way we do the data analysis is (1) to trim off the first 6 bases off of the 5'-end, followed by adapter trimming using "Trimomatic" (I am not a Bioinformatcian so I get this information from my Core facility). After adper sequences are trimmed, then the sequence analysis is performed using Bismark. If you have anything more specific, let me know.

Olaf
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