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Old 05-18-2010, 04:08 AM   #6
zslee
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Location: shanghai of china

Join Date: May 2009
Posts: 29
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Quote:
Originally Posted by jiaco View Post
From http://genome.ucsc.edu/
click Tables
then select the following form entries

Mammal : Human : Mar2006 (or the assembly you want)
Genes and Gene Prediction Tracks : UCSC Genes
knownGene
region: genome

outputformat: sequence
set an output file name
use gzip compression

get output

on the next page, you can select mRNA which will splice out introns and start the download of all ucsc known gene mRNA sequences in fasta format.

(but this is really a question for UCSC genome browser, no?)
yes, i've tried, it works, thanks to jiaco !
and i'm not familiar with UCSC
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