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Old 05-31-2012, 11:56 AM   #1
NGSNewbie1
Junior Member
 
Location: AZ

Join Date: May 2012
Posts: 1
Default Tumor/Normal comparison tool for VCF?

Sorry for this newbie question but I haven't been able to get an answer after searching around. Is there a program that automagically produces the somatic mutations from inputted tumor and normal VCF files? I'm trying to avoid using a tool like SomaticSniper with BAM files because of size/computation etc. If I have the VCF files, is there an easy way to just select the differences?

Thank you in advance for any guidance!
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