View Single Post
Old 06-14-2012, 09:46 PM   #10
Location: California

Join Date: Mar 2012
Posts: 97

Originally Posted by Baseless View Post

I reformatted mine to something that ensembl variant effect predictor can read and went for that during testing.

And to the others - if someone has advice which of the tools out there comes with a good false discovery rate, i am listening.
I discovered SNPEff works as well, with MuTect data. Just need removing the redundant columns...
shyam_la is offline   Reply With Quote