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Old 06-14-2012, 09:46 PM   #10
shyam_la
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Location: California

Join Date: Mar 2012
Posts: 97
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Quote:
Originally Posted by Baseless View Post
@shyam_la

I reformatted mine to something that ensembl variant effect predictor can read and went for that during testing.

And to the others - if someone has advice which of the tools out there comes with a good false discovery rate, i am listening.
I discovered SNPEff works as well, with MuTect data. Just need removing the redundant columns...
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