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Old 08-02-2018, 05:29 AM   #26
sunnycqcn
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Location: Canada

Join Date: Apr 2013
Posts: 17
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Quote:
Originally Posted by GenoMax View Post
You can use
Code:
reformat.sh in=your_file.fastq out=newfile.fa
to convert the reads to fasta format.

That said I think mapPacBio.sh should automatically split reads longer than 6k when it does mapping. Is that not working?
It is not working. I used fasta format.
Thanks,
Fuyou
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