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  • Small RNA Analysis Tool problems

    Hello to all!

    I have problems with 'Small RNA Analysis Tool'. I created concatenate genome (using corona), downloaded mirRNA.fasta and mirRNA.gff from database, configured - config.txt... however after begin program I read this info:


    Settings:

    reads file = /mss2/export/Artem/Human/A9/RNA_seq_A9_F3.csfasta

    configuration file = /mss2/export/Artem/Human/config_file_example.txt

    package directory = /mss2/export/SeqAnalSoft/Solid_RNA_Pipeline/0.5.0/bin

    output_directory = /mss2/export/Artem/Human/output/

    reference genome file /mss2/export/Genomes/fastas/human/chromosomes/human_valid.fasta DOES NOT EXIST, Please check the path...

    I checked path many times and permissions... All is normal.

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