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Old 05-31-2015, 11:52 PM   #1
Location: Uganda

Join Date: Jan 2015
Posts: 71
Default bioedit vs blastn results

hello, I have blasted my contigs and obtained some hits with high percentage identities. I then retrieved the fasta files of those hits and computed sequence identity matrix using bioedit. I expected the results from both blastn and bioedit to be the same, but they are not. Is this proper? if Not, what could be the problem?

I have attached a doc showing results
Attached Files
File Type: txt seq id mat.txt (1,000 Bytes, 3 views)
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