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Old 02-20-2014, 06:13 AM   #4
Wolfgang Huber
Senior Member
Location: Heidelberg, Germany

Join Date: Aug 2009
Posts: 109

Olga, Mariana

sorry for not responding earlier, not sure why this slipped through (it might also be useful to ask questions about Bioconductor packages on the Bioconductor mailing list first).

A lot has changed (improved) in the user interface and documentation of the DESeq2 package since October, so I suggest you have a look at the latest version ( ) and the vignette Analyzing RNA-Seq data with the "DESeq2" package. Also, we posted a preprint of the DESeq2 paper:
Let us then know when questions remain!

Kind regards
Wolfgang Huber

Last edited by Wolfgang Huber; 02-20-2014 at 06:16 AM. Reason: Typo fix
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