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Old 08-10-2015, 10:59 AM   #13
cmccabe
Senior Member
 
Location: chicago

Join Date: Jul 2012
Posts: 353
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Code:
 dnascopev@ubuntu:~$ mv /home/dnascopev/Desktop/hg19_fasta/bowtie2-2.6.0 /home/dnascopev/Desktop/
dnascopev@ubuntu:~$ export PATH=$PATH:/home/dnascopev/Desktop/bowtie2-2.6.0
dnascopev@ubuntu:~$ bowtie2-build -f /home/dnascopev/Desktop/hg19_fasta/hg19.fa /home/dnascopev/Desktop/hg19_fasta/my_hg19
Traceback (most recent call last):
  File "/home/dnascopev/Desktop/bowtie2-2.6.0/bowtie2-build", line 95, in <module>
    main()
  File "/home/dnascopev/Desktop/bowtie2-2.6.0/bowtie2-build", line 92, in main
    os.execv(build_bin_spec, argv)
OSError: [Errno 2] No such file or directory

downloaded the zip from: https://github.com/BenLangmead/bowtie2 as I am blocked from sourceforge.

Thank you for all your help .
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