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Old 05-22-2019, 12:47 PM   #2
SNPsaurus
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Location: Eugene, OR

Join Date: May 2013
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Can you multiplex that much on a Miseq and get enough reads per sample to reconstruct the mitogenome? I guess if the nuclear genome isn't large then a reasonable fraction of reads will go to the mitogenome.

You can use partial reaction of just Nextera DNA Flex and get good results. That might be the cheapest route.
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