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Old 09-12-2010, 10:43 PM   #1
Location: italy

Join Date: Sep 2010
Posts: 55
Default SOAPdenovo flag -F

Hi guys I am experiencing some problem with the flag -F of SOAPdenovo. The command I am using is the following:

./SOAPdenovo all -s vite.config -K 31 -D 2 -F -o output_file -p 8

but I get the following error message:

all: invalid option -- F

Am I doing anything wrong? Moreover. I did not understand the differences between the -F flag and using the GapCloser software

thanks for your help

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