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Old 09-20-2013, 12:31 AM   #1
gmarco
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Location: Spain

Join Date: Oct 2012
Posts: 36
Question CISA assembly contig integrator error

Hello,

I'm trying to use CISA to merge and optimize two de novo bacterial assemblies.
Process seems to work fine until the very last step. I'm getting this error:

Code:
Traceback (most recent call last):
  File "CISA.py", line 63, in <module>
    os.rename('Contigs_'+final+'.fa',outfile)
OSError: [Errno 18] Invalid cross-device link
I've chmoded all dirs to 755. And I'm the owner of all the dirs.

Any idea how to troubleshot this?

CISA website: http://sb.nhri.org.tw/CISA/en/CISA
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