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Old 05-01-2015, 02:06 PM   #5
Richard Finney
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Location: bethesda

Join Date: Feb 2009
Posts: 700
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The BB map home page ( http://sourceforge.net/projects/bbmap/ )says ...
Short read aligner for DNA and RNA-seq data.

Is there a special mode or feature that makes it good for RNA reads?
Does it handle long splices especially well ?
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