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Old 04-26-2009, 09:24 PM   #14
VIX_Z
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Location: INDIA

Join Date: Mar 2009
Posts: 11
Question Some queries for chip-seq analysis

Hi Alim,

Thanks for your previous help regarding chip-seq analysis.
I have few more queries for the same:
Can you tell me how does the RAM requirement varies with number of reads(or data size), while doing Chip-seq analysis ?
Does it increases continuously or gets some saturation in terms of RAM, I mean further increase in RAM will not help in processing the reads.
How can I view the content of rds files ?
Also can you suggest some links to get various sizes of sample data, that can be used for chip-seq analysis ?

Looking for your reply.
With THANKS!!
Vix
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