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Old 01-12-2015, 12:47 PM   #2
Devon Ryan
Location: Freiburg, Germany

Join Date: Jul 2011
Posts: 3,480

The tables are actually hard-coded, see here (N.B., that's an old version, but that part of the code hasn't changed substantially). You can always download the table from UCSC (or biomart if you prefer the Ensembl annotation, which you should) and then use makeTranscriptDbFromGff().
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