Does anyone can recommend a tool for Paired-end Illumina RNA-seq adapter trimming? Most of tools are for single-end sequence. I think if there a tools used for paired-end data.
The shortcoming of the single end tools:
1, The single end tools sometimes will make the paired-end data mess.
2, It does not consider paired-end information, if there is a tool for paired-end, such remove will be accurately.
The shortcoming of the single end tools:
1, The single end tools sometimes will make the paired-end data mess.
2, It does not consider paired-end information, if there is a tool for paired-end, such remove will be accurately.
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