oh yes you're right.
I have totally forgot it.
yes I checked the normalized values and it looks better:
Code:
sample1 sample2
FBgn0085379 1.608047 2.48749
FBgn0085380 167.236850 72.75908
FBgn0085382 162.412710 85.19653
FBgn0085383 141.508104 116.29016
FBgn0085384 144.724197 171.01494
FBgn0085385 28.944839 34.20299
FBgn0085386 64.321865 24.87490
FBgn0085387 25.728746 192.78048
FBgn0085388 1463.322439 2072.70108
FBgn0085390 308.744954 111.31518
FBgn0085391 154.372477 223.25223
how embarrassing
thanks