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Old 03-08-2017, 08:33 AM   #17
fanli
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Location: California

Join Date: Jul 2014
Posts: 198
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Out of curiosity, why are you joining the read pairs? A lot of the metagenomics software out there now supports paired end reads as input. The metaSPAdes assembler @GenoMax mentioned requires paired end data IIRC.
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