SEQanswers - View Single Post - Remove a part of a filename in a Bash loop

SNPsaurus · 10-09-2019, 10:34 AM

You want to split the string on a "." delimiter and then keep the first two parts. Or use ".fastq.sam.bam" as a delimiter, I suppose!

https://www.tutorialkart.com/bash-sh...-split-string/

10-09-2019, 10:34 AM	#2
SNPsaurus Registered Vendor Location: Eugene, OR Join Date: May 2013 Posts: 521	You want to split the string on a "." delimiter and then keep the first two parts. Or use ".fastq.sam.bam" as a delimiter, I suppose! https://www.tutorialkart.com/bash-sh...-split-string/ __________________ Providing nextRAD genotyping and PacBio sequencing services. http://snpsaurus.com