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Old 09-15-2020, 03:01 AM   #1
Faheema
Junior Member
 
Location: Sweden

Join Date: Sep 2020
Posts: 2
Default Blast is skipping some queries

I have a problem running Blast nt database against my query sequences(fungal assembly). I noticed that BLAST is skipping some of the queries i.e contigs from the assembly. Can anyone please help? How can I make Blast to process all queries? Is it something to do with the CPU time limit? I even tried splitting my assembly file into smaller parts and submit each part separately. It still skips some contigs from the smaller parts too.*
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