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Old 05-07-2018, 02:59 PM   #2
GenoMax
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Location: East Coast USA

Join Date: Feb 2008
Posts: 6,795
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Have you tried BBMerge to see if there are some reads that can merge (have insert sizes smaller than expected).

You could try bbmerge.sh's tadpole "extend "modes to see if you are able to assemble some of this data.

Last edited by GenoMax; 05-07-2018 at 03:06 PM.
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