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Old 02-17-2014, 08:20 AM   #4
Location: USA

Join Date: Sep 2012
Posts: 41

Originally Posted by maubp View Post
What kind of stats? If you just want the top hit, you can tell BLAST to only give you one hit per query.
The kind of summary stats I am aiming for or rather looking to extract is kinda similar of what is outputted by blast2go, ie in terms of top hit species and species distribution.
So, I was wondering if there is any other program out there that I can feed the BlastN results to get the stats. Or if anyone has a script to share that I can use to manipulate the data and extract such results.
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