SEQanswers - View Single Post

Brian Bushnell · 09-08-2014, 12:34 PM

Use the redirect operator ">" to pipe to a file:

bwa mem -t 20 50Gb_index ../../NZ_bowtie_nonaligned_hungate_thread.done.gz > mapped.sam

09-08-2014, 12:34 PM	#2
Brian Bushnell Super Moderator Location: Walnut Creek, CA Join Date: Jan 2014 Posts: 2,707	Use the redirect operator ">" to pipe to a file: bwa mem -t 20 50Gb_index ../../NZ_bowtie_nonaligned_hungate_thread.done.gz > mapped.sam