thank you for your response.
Can you explain me this output please.
Average coverage: 25,49
Standard deviation: 6,38
Percent scaffolds with any coverage: 100,00
Percent of reference bases covered: 99,85
and in covstats.txt:
Code:
#ID Avg_fold Length Ref_GC Covered_percent Covered_bases Plus_reads Minus_reads Read_GC Median_fold Std_Dev
gi|556503834|ref|NC_000913.3| Escherichia coli str. K-12 substr. MG1655, complete genome 26,6251 4641652 0,5079 99,8479 4634590 123276 118657 0,5042 26 6,38