View Single Post
Old 02-24-2009, 08:38 AM   #3
Senior Member
Location: USA

Join Date: Jan 2008
Posts: 482

Ohh, so thats changed in 1.3
Yes this was the case as Illumina updated its quality values based on Gerald alignments. If you check the quality values in Bustard folder, they should match irrespective of reference
bioinfosm is offline   Reply With Quote