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Old 12-02-2012, 06:55 AM   #2
gsgs
Senior Member
 
Location: germany

Join Date: Oct 2009
Posts: 140
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I don't know your programs and acronyms, but what I woulf do is
checking subsequences of length -say- 12. How many % of them are
found, this is easy to check even for big databases. (all viruses
from genbank or such)
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