View Single Post
Old 08-08-2016, 09:03 AM   #2
Location: Bay Area

Join Date: Aug 2011
Posts: 30


Short answer is yes. There are multiple ways to hack -- will require additional monitoring of the parallel jobs. But I first need to ask what parameters did you use to call What are the size bins (aka what are the subdirectories in clusterOut/)? Do you have an SGE cluster? Do you have multiple nodes from which you can run parallel cluster jobs?

Also, please consider joining the Iso-Seq google group:!forum/smrt_isoseq

Since is on the cutting edge (it's not officially supported in SMRTAnalysis 2.x but is on the agenda for SMRTAnalysis 3.x), the google group is better suited

Magdoll is offline   Reply With Quote