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Old 10-07-2010, 05:29 AM   #4
Location: Belgium

Join Date: Nov 2008
Posts: 79

highly repetitive....
we have the illumina dataset available. But we are thinking of adding a 454 low coverage set. I think we can do three things:
- all de novo (hybrid assembly)
- illumina de novo and than map them back on the 454 reads
- map the illumina reads directly to the 454 reads

Before doing this, I want to know if a 454 run will bring additional information.
Tools? I was thinking of MIRA
strob is offline   Reply With Quote