de novo assembler for se 36 bp illumina reads

[srividyanathan]

Hi,

I am wondering if there is any de novo assembler that can work with 25x coverage 36 bp solexa reads. I saw that a few requires paired end reads to work with. Some others require longer reads. Can anyone suggest any software that can work with these reads,

thank you,

[mastal]

de novo assembler for se 36 bp illumina reads

Velvet should work.

[sivasubramani]

try minia... fast and memory efficient..

Good luck..