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I have a small dataset containing five genes and their expression at 20 different time points, I want to construct the transcriptional regulatory network based on the data. Are there any tools or tutorials available to do this? I would much prefer tutorials.
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Do your genes have impact on each others? If I understand well, the only data you have are mRNA levels, no protein levels, etc...
If your genes are transcriptional regulators, and making some assumptions that the mRNA levels directly reflect the active form of the protein levels, then maybe it is possible (i actually had a project like that 15 years ago but we had the mutants of each gene so we could infer the regulatory network between 5 transcriptional factors)
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Data variability is still an issue in sequencing technologies despite the advances in reproducibility and accuracy of these platforms. But the problem does not originate in the sequencing itself, but in the previous steps, before the sample reaches the sequencer.
The first step is collection, followed by preservation and sample preparation for analysis. Most scientists overlook those steps, but not being careful might just be skewing the experiment’s results.
...06-02-2026, 10:05 AM -
With the launch of new single-cell sequencing platforms in 2026, the field stands at an exciting inflection point. This article surveys the most impactful advances in the field and discusses how they’re reshaping research in cancer, immunology, and beyond.
Introduction
Single-cell sequencing technologies have undergone remarkable advances over the past decade, transitioning from low-throughput experimental approaches to highly scalable platforms capable of...05-22-2026, 06:42 AM
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