Tweet
Hi Everyone,
I recently started working with the blast command line, and I seem to have hit a road block.
My directories look like this blast -> dbs, out, query
I loaded my ncbi_blast using [module load ncbi_blast]
Then I ran it using the command line [makeblastdb -in Zfish -dbtype prot]
Inside of the dbs folder I have a unpacked files called Zfish, Zfish.phr, Zfish.pin, Zfish.psq
My question is how do I make this Zfish blast result file into a .html file in the out folder? I want to be able to extract it using FileZilla once it is done. I tried running [$ makeblastdb -in Zfish -dbtype prot -out Zfish.html] but all it made was the same files with a .html prefix.
Please let me know if you have a solution to this issue. Any advice will be greatly appreciated.
I recently started working with the blast command line, and I seem to have hit a road block.
My directories look like this blast -> dbs, out, query
I loaded my ncbi_blast using [module load ncbi_blast]
Then I ran it using the command line [makeblastdb -in Zfish -dbtype prot]
Inside of the dbs folder I have a unpacked files called Zfish, Zfish.phr, Zfish.pin, Zfish.psq
My question is how do I make this Zfish blast result file into a .html file in the out folder? I want to be able to extract it using FileZilla once it is done. I tried running [$ makeblastdb -in Zfish -dbtype prot -out Zfish.html] but all it made was the same files with a .html prefix.
Please let me know if you have a solution to this issue. Any advice will be greatly appreciated.