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  • kgosche@partek.com
    Member
    • Aug 2016
    • 16

    Tissue Transcriptomics Data Analysis in Partek Flow: Data Import, Analysis, and Vis

    Join Us for a Webinar:

    Tissue Transcriptomics Data Analysis in Partek Flow - Data Import, Analysis, and Visualization

    Three Sessions to Choose From - (Same content in all sessions):
    April 1, 2020, 2:15 p.m. SGT | April 2, 2020, 2:15 p.m. BST | April 2, 2020, 2:15 p.m. EDT

    REGISTER

    Abstract:
    Tissue transcriptomics is a family of techniques designed to allow transcriptomic profiling of cells within a tissue. It has gained a lot of attention over the past two years and is paralleling and extending advances made in single cell RNA-Seq technology.

    Join us for a webinar where we will demonstrate the analysis of 10x Visium data in Partek Flow software. You will learn how to leverage its statistical power to answer your biological questions and see exciting new features in the Partek Flow Data Viewer.

    What You Will Learn:
    • Import 10x Genomics spatial transcriptomics data
    • Combine gene expression data with histological information
    • Identify clusters of spots based on gene expression profiles
    • Perform differential gene expression

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  • SEQadmin2
    Nine Things a Sample Prep Scientist Thinks About Before Sequencing
    by SEQadmin2


    I’m not a sequencing expert. I’m a purification scientist who uses NGS to evaluate workflows my group develops. With this perspective, we think about the sample first and the NGS workflow second. The sequencer is an exceptionally honest reporter, but it can only report on what you give it, so whether you get clean, interpretable data from an NGS workflow is largely determined before you begin.

    Here are nine questions we think about, in roughly the order they matter, before...
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  • SEQadmin2
    From Collection to Sequencing: Why Sample Preparation and Preservation Define Sequencing Data
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    Data variability is still an issue in sequencing technologies despite the advances in reproducibility and accuracy of these platforms. But the problem does not originate in the sequencing itself, but in the previous steps, before the sample reaches the sequencer.


    The first step is collection, followed by preservation and sample preparation for analysis. Most scientists overlook those steps, but not being careful might just be skewing the experiment’s results.
    ...
    06-02-2026, 10:05 AM

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