Hello,
Does any one know how can I create gene models (GFF files) from RNA-seq reads or alignments ?
Inputs: RNA-seq reads and reference genome, I also have the bam mapping file produced from Tophat.
I used cufflinks, but I need another tool to compare between them.
Thank you in advance.
Bes
Does any one know how can I create gene models (GFF files) from RNA-seq reads or alignments ?
Inputs: RNA-seq reads and reference genome, I also have the bam mapping file produced from Tophat.
I used cufflinks, but I need another tool to compare between them.
Thank you in advance.
Bes