Hello everybody,
I'm quite new in NGS. I'm looking for tools/stuff/idea to find Structural Variation (large deletion or tandem duplication) using RNA-Seq dataset (Illumina 100bp pair-end reads).
Could I use delly? This algorithm should work with DNA-Seq, may I use it with my RNA-Seq dataset?
So I look to the community if anyone can help me in my search for deletion.
Thank you for any help you can provide.
Luciano
I'm quite new in NGS. I'm looking for tools/stuff/idea to find Structural Variation (large deletion or tandem duplication) using RNA-Seq dataset (Illumina 100bp pair-end reads).
Could I use delly? This algorithm should work with DNA-Seq, may I use it with my RNA-Seq dataset?
So I look to the community if anyone can help me in my search for deletion.
Thank you for any help you can provide.
Luciano
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