Seqanswers Leaderboard Ad

Collapse

Announcement

Collapse
No announcement yet.
X
 
  • Filter
  • Time
  • Show
Clear All
new posts

  • Trouble downloading Resource Bundle from Broad Institute

    Sorry all for being so inexperienced, but I am at a loss for how to download the Resource Bundle from Broad's FTP site. I see this on the Broad's website,

    Inside of the Broad, the latest bundle will always be available in:

    /humgen/gsa-hpprojects/GATK/bundle/current

    with a subdirectory containing for each reference sequence and associated data files.

    External users can download these files (or corresponding .gz versions) from the GSA FTP Server in the directory bundle. Gzipped files should be unzipped before attempting to use them. Note that there is no "current link" on the FTP; users should download the highest numbered directory under current (this is the most recent data set)
    along with the following:

    Downloading

    location: ftp.broadinstitute.org
    username: gsapubftp-anonymous
    password: <blank>
    Any help would be greatly appreciated.

    -L

  • #2
    Since you are not on broad campus you can't use the first method to download the bundle.

    You could use any ftp program of your choice with the information you quoted in the second quote above to download the program.

    or use this link ftp://gsapubftp-anonymous:@ftp.broadinstitute.org/

    If a password prompt window pops up next just hit enter. The "bundle" directory will be on the page that shows up next.
    Last edited by GenoMax; 08-01-2014, 03:04 AM.

    Comment

    Latest Articles

    Collapse

    • seqadmin
      Recent Advances in Sequencing Analysis Tools
      by seqadmin


      The sequencing world is rapidly changing due to declining costs, enhanced accuracies, and the advent of newer, cutting-edge instruments. Equally important to these developments are improvements in sequencing analysis, a process that converts vast amounts of raw data into a comprehensible and meaningful form. This complex task requires expertise and the right analysis tools. In this article, we highlight the progress and innovation in sequencing analysis by reviewing several of the...
      05-06-2024, 07:48 AM
    • seqadmin
      Essential Discoveries and Tools in Epitranscriptomics
      by seqadmin




      The field of epigenetics has traditionally concentrated more on DNA and how changes like methylation and phosphorylation of histones impact gene expression and regulation. However, our increased understanding of RNA modifications and their importance in cellular processes has led to a rise in epitranscriptomics research. “Epitranscriptomics brings together the concepts of epigenetics and gene expression,” explained Adrien Leger, PhD, Principal Research Scientist...
      04-22-2024, 07:01 AM

    ad_right_rmr

    Collapse

    News

    Collapse

    Topics Statistics Last Post
    Started by seqadmin, 05-07-2024, 06:57 AM
    0 responses
    12 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 05-06-2024, 07:17 AM
    0 responses
    16 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 05-02-2024, 08:06 AM
    0 responses
    22 views
    0 likes
    Last Post seqadmin  
    Started by seqadmin, 04-30-2024, 12:17 PM
    0 responses
    24 views
    0 likes
    Last Post seqadmin  
    Working...
    X