Seems to be added to path, but I am getting the below error. What is wrong? Thank you .
EDIT: tried chmod as well
Code:
cmccabe@HPZ640:~$ echo $PATH /home/cmccabe/Desktop/NGS/bedops-2.14.4/bin:/home/cmccabe/Desktop/NGS/samtools-1.2:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games cmccabe@HPZ640:~$ cd "/home/cmccabe/Desktop/NGS" cmccabe@HPZ640:~/Desktop/NGS$ gunzip --stdout /home/cmccabe/Desktop/bed/gencode.v19.annotation.gtf.gz \ > | gtf2bed - \ > | grep "exon" \ > > /home/cmccabe/Desktop/NGS/bed/gencode.exons.bed [B]bash: /home/cmccabe/Desktop/NGS/bedops-2.14.4/bin/gtf2bed: Permission denied[/B]
EDIT: tried chmod as well
Code:
chmod +x /home/cmccabe/Desktop/NGS/bedops-2.14.4/bin*
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