Hi,
I have an OTU biom file (obtained from Closed reference QIIME 1.8.0 v) contains 65 samples, I am trying to do analysis for PAN/CORE genome.
I have filtered out the taxonomy from the abundance file (with particular threshold, lets say 60 %), now i have an taxonomy column only in file from all the 65 samples (with threshold 60%), Is there is a way where i can do the functional annotation for it ?
Any server/ software is there which can do that ?
Any suggestions ?
Best !
Shashank
I have an OTU biom file (obtained from Closed reference QIIME 1.8.0 v) contains 65 samples, I am trying to do analysis for PAN/CORE genome.
I have filtered out the taxonomy from the abundance file (with particular threshold, lets say 60 %), now i have an taxonomy column only in file from all the 65 samples (with threshold 60%), Is there is a way where i can do the functional annotation for it ?
Any server/ software is there which can do that ?
Any suggestions ?
Best !
Shashank
Comment