Hi!
For an internal project we are doing, we are trying to get at the actual index sequence for each read (all reads, whether it winds up in the undetermined indices bin or not).
We are using casava 1.8.2. From what I can tell looking at the Casava User Guide, this information is only present in the binary .bcl files.
Does anyone know of another way to retrieve this information, other than writing a script that parses binary?
Thanks for reading!
For an internal project we are doing, we are trying to get at the actual index sequence for each read (all reads, whether it winds up in the undetermined indices bin or not).
We are using casava 1.8.2. From what I can tell looking at the Casava User Guide, this information is only present in the binary .bcl files.
Does anyone know of another way to retrieve this information, other than writing a script that parses binary?
Thanks for reading!
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