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Old 07-20-2015, 01:48 AM   #1
meghavarshney
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Default correlation analysis on gene basis

hello every one,

as i am learning RNA seq analysis so can anyone told m how to calculate correlation among 3 biological replicates on the basis of "gene and their fpkm".
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Old 07-27-2015, 07:57 AM   #2
goutham.atla
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cor() function in R should be able to do that.
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Old 07-27-2015, 11:20 PM   #3
meghavarshney
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actually i need to know correlation genewise not samplewise so can you help me in that matter
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bioconductor, correlation, cummerbund, fpkm cuffdiff, rna sequencing

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