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Old 12-28-2017, 02:19 AM   #1
Yexzm
Junior Member
 
Location: Paris

Join Date: Dec 2017
Posts: 5
Default Problem with downloading ANNOVAR databases

Hi ! I'm trying to download ANNOVAR db using :

./annotate_variation.pl -buildver hg19 -downdb exac03 humandb

and I get :

Code:
WARNING: cannot retrieve remote files automatically (by 'wget' command or by standard Net::FTP/LWP::UserAgent Perl module).
Please manually download the following file, uncompress the files to humandb directory, then add a hg19_ prefix to the file names.
http://hgdownload.cse.ucsc.edu/goldenPath/hg19/database/exac03.txt.gz
However, wget, Net::FTP and LWP::UserAgent seem to be installed :

Code:
which wget
/usr/bin/wget
And I get documentation when I write "perldoc Net::FTP" or "LWP::UserAgent". Could anyone help me ?

Thanks !!!
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