Go Back   SEQanswers > Bioinformatics > Bioinformatics

Similar Threads
Thread Thread Starter Forum Replies Last Post
inchworm and paired ends ians Bioinformatics 4 10-05-2011 07:55 AM
Velvet & paired-ends AdrianP De novo discovery 16 05-31-2011 11:56 AM
bfast bgeneratereads for paired ends sdvie Bioinformatics 2 03-23-2011 11:04 AM
paired ends with cuffdiff Greg Bioinformatics 1 07-05-2010 11:12 AM
consed and illumina paired ends ggloor Bioinformatics 1 06-22-2009 09:46 PM

Thread Tools
Old 04-15-2010, 08:29 AM   #1
Location: Edinburgh

Join Date: Mar 2010
Posts: 16
Default MAQ paired ends

Hi all, I'm running easyrun to assemble bacterial sequences. However I am not getting the unmapped reads dumped to a file as I do when assembling single end reads.

Is it possible to dump the unmapped reads or does anyone know of a workaround?


prm36 is offline   Reply With Quote

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off

All times are GMT -8. The time now is 06:18 AM.

Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2021, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO