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  • Sorting Amino Acid Sequences

    I have a a set of three fasta files with amino acid sequences. Can you suggest me scripts to separate out sequences that are common, and as well that are different among each of the three fasta files?
    Last edited by satishg; 08-25-2015, 11:39 AM.

  • #2
    Look into CD-HIT (http://weizhongli-lab.org/cdhit_suite/cgi-bin/index.cgi). Depending on how large your files are you may need to contact the lab.

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    • #3
      Thanks ! I was able to install it locally. I will explore it.

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