Dear all,
I tried to create a denovo annotation,
but after running cuffmerge I recieved only the following files in my output folder:
merge_denovo/logs/run.log
merge_denovo/tmp/gtf2sam_fileMU1yNJ
what has happened? I used the command:
cuffmerge -p 2 -o merge_denovo -g ref_Amel_4.5_top_level_edited.gff3 -s Amel3/Amel_genome.fa assemblies.txt
In assemblies.txt I have the PATHs to all my .gtf files that should be merged.
Thanks for your help,
Ash
I tried to create a denovo annotation,
but after running cuffmerge I recieved only the following files in my output folder:
merge_denovo/logs/run.log
merge_denovo/tmp/gtf2sam_fileMU1yNJ
what has happened? I used the command:
cuffmerge -p 2 -o merge_denovo -g ref_Amel_4.5_top_level_edited.gff3 -s Amel3/Amel_genome.fa assemblies.txt
In assemblies.txt I have the PATHs to all my .gtf files that should be merged.
Thanks for your help,
Ash
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