My data was generated in solexa 1.3,pair-end,100bp.When I use BWT as my aligner,I should trim <INT> reads towards the 3',because as closer to 3',the read qualty is getting worse. My question is:HOW TO SET the <INT>.CAN somebody tell me if you are an expert or have encouter such problem.
YOU can also e-mail me:[email protected]
YOU can also e-mail me:[email protected]
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