SEQanswers

Go Back   SEQanswers > General



Similar Threads
Thread Thread Starter Forum Replies Last Post
Searching for paired reads around a location Ash Bioinformatics 2 10-12-2011 03:21 AM
PubMed: SeqWare Query Engine: storing and searching sequence data in the cloud. Newsbot! Literature Watch 0 05-28-2011 12:13 PM
PubMed: Local De Novo Assembly of RAD Paired-End Contigs Using Short Sequencing Reads Newsbot! Literature Watch 0 05-06-2011 12:40 AM
searching 454 (single read) + Illumina paired-end or matepair data boetsie General 0 10-04-2010 02:45 AM
Instructions for scaffolding MIRA 454 contigs & 25 KB paired-end data with BAMBUS edge Bioinformatics 1 09-30-2009 02:04 AM

Reply
 
Thread Tools
Old 08-06-2010, 02:11 AM   #1
boetsie
Senior Member
 
Location: NL, Leiden

Join Date: Feb 2010
Posts: 245
Default searching for contigs and paired data

Hi all,

does anybody know where i can download both assembled contigs in .fasta and paired-end and/or mate-pair data for a large genome?

I can never find unfinished contig sequences for large genomes, only finished sequences. Option to assemble myself is impossible, since we don't have enough memory to assemble such large genomes.

Has someone an idea?

Cheers,
Marten
boetsie is offline   Reply With Quote
Reply

Thread Tools

Posting Rules
You may not post new threads
You may not post replies
You may not post attachments
You may not edit your posts

BB code is On
Smilies are On
[IMG] code is On
HTML code is Off




All times are GMT -8. The time now is 08:17 AM.


Powered by vBulletin® Version 3.8.9
Copyright ©2000 - 2018, vBulletin Solutions, Inc.
Single Sign On provided by vBSSO