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Old 01-18-2016, 10:48 AM   #1
gauravgunjal
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Location: India

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Default Agilent ChIP-chip data analysis in R for bacteria

Can anyone help me to get a pipeline for analyzing Agilent ChIP-chip data analysis using R package for bacteria. I used Ringo but there is problem in following command.

>pA <- extractProbeAnno(RG, "agilent", genome="mouse",
+ microarray="Agilent Tiling Chr17")

What changes should be made in files so it extractProbeAnno can read for bacteria.
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